PAPERS
Paper Tracks
• Advanced Research Computing Software and Applications
• Facilitation of Advanced Research Computing
• Machine Learning and Artificial Intelligence
• Workforce Development and Diversity
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Advanced Research Computing Software
Applications
A Science Gateway for Atomic and Molecular Physics
Armin Scrinzi
Barry Schneider
Fernando Martin
Igor Bray
Jimena Garfinkiel
Advanced Research Computing Containers for AI Workloads
Kyle J. Smathers
Mark E. DeYoung
Marvin W. Newlin
Automatic Modulefile Generation in Environment Modules and Lmod Systems with mkmod
Kent F. Milfeld
Building A Scalable Forward Flux Sampling Framework using Big Data and HPC
Amy W. Apon
Jon Kilganon
Linh B. Ngo
Combining OpenCL and MPI to Support Heterogeneous Computing on a Cluster
John Hale
Ming Li
Peter Hawrylak
Community Collections: A Framework for Openly Sharing Software Stacks Across Research Computing Centers Using Singularity and Lmod
Kevin Manalo
Levi Baber
Nuyun Zhang
Connecting Diffusion MRI to Skeletal Muscle Microstructure: Leveraging Meta-Models and GPU-acceleration
John G. Georgiadis
Noel M. Naughton
Enabling Real-time User Interaction For Decision Support: Experiences Extending A Local Agave Platform Metadata Service
Gwen A. Jacobs
Jared McLean
Kolja Rotzoll
Expanding the Computational Anatomy Gateway from clinical imaging to basic neuroscience research
Anthony Kolasny
Daniel J. Tward
Fatima Kahn
Exploring Untrusted Distributed Storage for
High Performance Computing
Austin Smith
Justin Riley
Milan Kupcevic
Extensible Framework for Analysis of Farm Practices and Programs
Christopher M. Navarro
Gary D. Schnitkey
Gowtham Naraharisetty
Hanseok Jeong
Jonathan Coppess
Jong S. Lee
Lisa Gatzke
GenApp, Containers andAbaco
Emre H. Brookes
Joe Stubbs
Greyfish: An Out-of-the-Box, Reusable, Portable Cloud Storage Service
Carlos Redondo
Ritu Arora
HUBzero®: Novel Concepts Applied to Established Computing Infrastructures to Address Communities’ Needs
Ben Haley
Claire Stirm
Michael Zentner
Implementing a Flexible, Fault Tolerant Job Management System for Science Gateways
Ajinkya Dhamnaskar
Dimuthu Wannipurage
Eroma Abeysinghe
Gourav Shenoy
Lahiru Jayathilaka
In-situ Analysis and Visualization of Earthquake Simulation
Dawei Mu
Hui Zhou
Jon Moran
Mahidhar Tatineni
Integrity Protection for Scientific Workflow Data: Motivation and Initial Experiences
Anirban Mandal
Ewa Deelman
F. Alex Feltus
Ilya Baldin
Karan Vahi
Mats Rynge
Introducing the Open Science Chain -- Protecting Integrity and Provenance of Research Data
Subhashini Sivagnanam
Viswanath Nandigam
Leveraging Elasticsearch to Improve Data Discoverability in Science Gateways
Jake Rosenberg
Joseph Meiring
Josue B. Coronel
openDIEL: A Parallel Workflow Engine and Data Analytics Framework
Daniel Nichols
Efosa Asemota
Frank H. Betancourt
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Reproducible Hydrological Modeling with CyberGIS-Jupyter:
A Case Study on SUMMA
Anand Padmanabhan
Anthony Castronova
Dandong Yin
David Tarboton
Scalable Parallel Programming in Python with Parsl
Anna Woodard
Daniel S. Katz
Ian Foster
Kyle Chard
Shuffler: A Large Scale Data Management Tool for Machine Learning in Computer Vision
Evgeny Toropov
José Moura
Paola A. Buitrago
Singularity: simple, secure containers for computer-driven workloads
David C. Godlove
The PreSync Project: Synchronization Automation in the Cactus Framework
Roland Haas
Samuel D. Cupp
Steven R. Brandt
Web of Trust Tool for Gateway User Vetting
Amitava Majumdar
Kenneth K. Yoshimoto
Mark A. Miller
Web-based Visualization and Querying of Food and Beverage Endorsements by Celebrities
Faiz Abidi
Srijith Rajamohan
Facilitation of Advanced Research Computing
A Continuous Integration-Based Framework for Software Management
Eric Franz
Heechang Na
Judith Gardiner
Karen Tomko
A Multi-Environment HPC-Scale Puppet Infrastructure for Compliance and Systems Automation
Edward Munsell
Evan F. Bollig
Jeffrey McDonald
A Resource Utilization Analytics Platform Using Grafana and Telegraffor the Savio Supercluster
Nicolas A. Chan
Arbiter: Dynamically Limiting Resource Consumption on Login Nodes
Brian Haymore
Dylan Gardner
Robben Migacz
Assessment of Return on Investment and impact of cyberinfrastructure facilities: a survey of current methods
Alan Sill
Amy Apon
Craig Stewart
David Lifka
Deploying a Top-100 Supercomputer for Large Parallel Workloads: the Niagara Supercomputer
Alexey Fedoseev
Bruno Mundim
Ching-Hsing Yu
Daniel Gruner
Erik Spence
Fatih Ertinaz
Fei Mao
Jaime Pinto
Joseph Chen
Developing and Operating Edge Services on Federated Infrastructure Using MiniSLATE
Benjamin Kulbertis
Christopher K. Weaver
Joe Breen
Expressing and Managing Network Policies for Emerging HPC Systems
James Griffioen
Jane Hayes
Good Enough Project Management Practices for Researcher Support Projects
Christina Maimone
Harmony: A Harness Monitoring System for the Oak Ridge Leadership Computing Facility
Cameron Kuchta
Reuben Budiardja
Verónica G. Vergara Larrea
IceCube’s Long Term Archive Software
Benedikt Riedel
David Schultz
Patrick Meade
Making it More Secure: The Technical and Social Challenges of Expanding the Functionality of an Existing HPC Cluster to Meet University and Federal Data Security Requirements
Christopher Doane
Gary Jung
Jason Christopher
Managing a Heterogeneous Cluster
Adam Tygart
Dan Andresen
Managing Privilege and Access on Federated Edge Platforms
Christopher N. Weaver
Joe Breen
Mii: An Automated Search Engine for Environment Modules
Justin Stanley
ORCID Integration Into Science Gateways
Carrie Arnold
Dave Hart
Performant Container Support for HPC Applications
Lei Huang
R. Todd Evans
Yinzhi Wang
Petrel: A Programmatically Accessible Research Data Service
Ben Blaiszik
Benjamin S. Allen
Ian Foster
Kyle Chard
Lukasz Lacinski
Providing a Unified Software Environment for Canada’s National Advanced Computing Centers
Bart Oldeman
Maxime Boissonneault
Ryan P. Taylor
Provisioning ZFS Pools On Lustre
Adam Howard
Rick Mohr
PULSAR:Deploying Network Monitoring and Intrusion Detection for the Science DMZ
Brian Werts
Callum Gundlach
Erik Gough
Jacob Sharp
Lauren Featherstun
Lev Gorenstein
Research Computing Desktops: Demystifying research computing for non-Linux users
Abhinav Thota
Alexander Younts
Ben Fulton
Christopher Phillips
Daniel T. Dietz
H.E. Cicada B. Dennis
Serverless Science Gateway Development for Ca2+ binding site prediction on Amazon Web Services: Case Study
Melchizedek G. Mashiku
NeranjanS. Edirisinghe
StashCache: A Distributed Caching Federation for the Open Science Grid
Brian Bockelman
Brian Lin
Derek Weitzel
Edgar Fajardo Hernandez
Ilija Vukotic
The biggest failure of my career: what happened, what we did about it, and how we won’t do it again.
Jonathon Anderson
Trusted CI Experiences in Cybecurity and Service to Open Science
Andrew Adams
Barton P. Miller
Craig Jackson
Dana Brunson
Elisa Heymann
Florence Hudson
Jeannette Dopheide
Jim Basney
Jim Marsteller
John Zage
Wrangling Rogues: A Case Study on Managing Experimental Post-Moore Architectures
Jason Riedy
Jeffrey S. Young
Thomas M. Conte
Will Powell
Machine Learning and Artificial Intelligence
A Framework for Identifying Designs from Incomplete, Fragmented Cultural Heritage Objects using Curve Patterns
Ben Torkian
Colin Wilder
Jun Zhou
Karen Smith
Paul Sagona
Song Wang
Yuhang Lu
A Novel Pruning Method for Convolutional Neural Networks Based off Identifying Critical Filters
Mihaela Dimovska
Travis Johnston
Automated Deep Learning Analysis of Purple Martin Videos Depicting Incubation and Provisioning
Heather M. Williams
L. Shawn Matott
Robert L. DeLeon
Characterizing the Execution of Deep Neural Networks on Collaborative Robots and Edge Devices
Abhijeet Saraha
Arthur Siqueira
Bingyao Wang
Chunjun Jia
Dongsuk Lim
Hyesoon Kim
Jiashen Cao
Lixing Liu
Matthew L. Merck
Qiusen Huang
Ramyad Hadidi
Developing a Meta Framework for Key-Value Memory Networks on HPC Clusters
Arghya K. Das
Choonhan Youn
Joohyun Kim
Seungwon Yang
Extracting Domain Information using Deep Learning
Amit Gupta
Crispin Taylor
Jennifer Regala
Pankaj Jaiswal
Weijia Xu
Facial Expression Recognition: Utilizing Digital Image Processing, Deep Learning, and High-Performance Computing
Francisco Reveriano
Improving HPC System Performance by Predicting Job Resources via Supervised Machine Learning
Adedolapo Okanlawon
Brandon Dunn
Dan Andresen
Mohammed Tanash
William Hsu
Yang Huichen
In and out of the nucleus - CNN-based segmentation of cell nuclei from images of a translocating biosensor
Jeremy E. Purvis
Katarzyna M. Kedziora
Michael R. Kosorok
Tarek M. Zikry
MagmaDNN: Accelerated Deep Learning Using MAGMA
Alex Gessinger
Daniel L. Nichols
Kwai Wong
Lucien Ng
Sihan Chen
Stanimire Tomov
Open Compass: Accelerating the Adoption of AI in Open Research
Nicholas A. Nystrom
Paola A. Buitrago
Publishing and Serving Machine Learning Models with DLHub
Anna Woodard
Ben Blaiszik
Ian Foster
Kyle Chard
Logan Ward
Ryan Chard
Steven Tuecke
Yadu Babuji
Zhuozhao lI
Towards a Framework for Validating Machine Learning Results in Medical Imaging
Frank M. Skidmore
Murat M. Tanik
Thomas Anthony
William S. Monroe
Traps, Pitfalls and Misconceptions of Machine Learning applied to Scientific Disciplines
Alessandro Fanfarillo
Davide Del Vento
VAStream: A Visual Analytics System for Fast Data Streams
Raju Gottumukkala
Satya Katragadda
Siva Venna
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Workforce Development and Diversity
An Expansion of the User Support Services for the Research Computing Group at the University of Colorado Boulder
Aaron Holt
Andrew J. Monaghan
Daniel Trahan
Joel Frahm
Patrick Burns
Shelley L. Knuth
Thomas Hauser
Timothy Dunn
Zebula Sampedro
Campus Champions: Building and sustaining a thriving community of practice around research computing and data
Aaron Culich
Dana Brunson
Douglas Jennewein
Henry Neeman
Jack Smith
Julie Wernert
Lizanne DeStefano
Lorna Rivera
Marisa Brazil
Tiffany Jolley
Timothy Middelkoop
Cultivating the Cyberinfrastructure Workforce via an Intermediate/Advanced Virtual Residency Workshop
Christopher S. Simmons
Dana Brunson
Daniel Voss
Dirk Colbry
Henry Neeman
Hussein M. Al-Azzawi
James W. Ferguson
Jason Wells
Jason L. Simms
Jeff T. Falgout
Joshua Gyllinsky
Mohammed Tanash
Sandra Gesing
Scott Yockel
William Burke
Cyber Infrastructure: Training and Mentoring - A way to engage students in their technology future
D. Brian Ormand
Diana V. Dugas
DeapSECURE: Empowering Students for Data- and Compute-Intensive Research in Cybersecurity through Training
Hongyi Wu
Karina Arcaute
Masha Sosonkina
Wirawan Purwanto
Holistic Summer Undergraduate Research Program in High PerformanceComputing Research
Jung-Han Kimn
Stephen P. Gent
Tyler M. Miller
Integrating scientific programming in communities of practice for students in life science
Alexa M. Salsbury
Anne M. Brown
Justin A. Lemkul
Mining Online Training Log Data
Christopher R. Myers
Jennifer Houchins
Lorna Rivera
Susan Mehringer
The Blue Waters Petascale Institute: Longitudinal Impact and Assessment-Driven Development of an Intensive, Hands-on Curriculum for Teaching Applications in HPC
Aaron Weeden
Cameron Foss
Colleen Heinemann
Jennifer Houchins
Mobeen Ludin
Skylar Thompson
The CyberAmbassador Training Program
Astri Briliyanti
Dirk J. Colbry
Julie Wilson Rojewski
Kathleen Colbry
TJ Nguyen
The Professionalization of Cyberinfrastructure Personnel?
Dana Brunson
Henry Neeman
James Bottum
James Howison
Joel Cutcher-Gershenfeld
John Towns
John L. King
Nancy Wilkins-Diehr
nicholas berente
Stanley Ahalt
Susan Winter
Undergraduate Data Science and Diversity at Purdue University
Alex Younts
Elizabett Hillery
Eric Adams
Jenna Rickus
Mark D. Ward
Preston Smith
Jonathan Tennyson
Klaus Bartschat
Markus Klinker
Oleg Zatsarinny
Sudhakar Pamidighantam
Ryan S. DeFever
Sapna Sarupria
Walter Hanger
Muneeba Syed
Paul Edmon
Scott Yockel
Michal Ondrejcek
Rabin Bhattarai
Rishabh Gupta
Sandeep Puthanveetil Satheesan
Shannon Bradley
Yan Zhao
Marcus Christie
Marlon Pierce
Sudhakar Pamidighantam
Suresh Marru
Ronald Hawkins
Steve Campbell
Yifeng Cui
Omkar Bhide
Randy Heiland
Raquel Hill
Von Welch
William L. Poehlman
Kwai Wong
Quindell Marshall
Stan Tomov
Fangzheng Lu
Jon Goodall
Shaowen Wang
Young Don Choi
Ryan Bradley
Zhi-Qiang You
Sandra Gesing
Steve Clark
Sarah Gray
Tracy Brown
Michael Wilde
Yadu N. Babuji
Zhuozhao lI
Nicholas T. Carnevale
Subhashini Sivagnanam
Samuel Khuvis
Scott Brozell
Trey Dockendorf
Zhi-Qiang You
Michael Baynton
Nicholas Bertrand
Raychel M. Benson
David Y. Hancock
Nicholas Berente
Robert Henschel
Thomas Furlani
Leslie Groer
Marcelo Ponce
Marco Saldarriaga
Michael Nolta
Ramses Van Zon
Richard W. Peltier
Scott Northrup
Vladimir Slavnic
Robert Gardner
Shawn McKee
Sergio A. Rivera
Zongming Fei
Dave Turner
Kyle Hutson
Robert Gardner
Shawn McKee
Ester Soriano
Maytal Dahan
Michael Papka
Rachana Ananthakrishnan
Rick Wagner
Ryan Chard
William E. Allcock
Lipu Wu
Nathan DeMien
Sagar Narayan
Shivam Trivedi
Xiao Zhu
Laura Huber
Le Mai Weakley
Scott Michael
Stephen L. Harrell
Winona Snapp-Childs
Xiao Zhu
Scot K. Izuka
Sean B. Cleveland
Juan Troncoso
Michael I. Miller
Kay Avila
Mark Krenz
Robert Cowles
Ryan Kiser
Scott Russell
Sean Peisert
Susan Sons
Terry Fleury
Von Welch
Marian Zvada
Mats Rynge
Matyas Selmeci
Rob Gardner